Package: ecan 0.2.1.9000
ecan: Ecological Analysis and Visualization
Support ecological analyses such as ordination and clustering. Contains consistent and easy wrapper functions of 'stat', 'vegan', and 'labdsv' packages, and visualisation functions of ordination and clustering.
Authors:
ecan_0.2.1.9000.tar.gz
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ecan.pdf |ecan.html✨
ecan/json (API)
NEWS
| # Install 'ecan' in R: |
| install.packages('ecan', repos = c('https://matutosi.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/matutosi/ecan/issues
Pkgdown site:https://matutosi.github.io
Last updated 5 months agofrom:b00f309311. Checks:8 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 29 2025 |
| R-4.5-win | OK | Jan 29 2025 |
| R-4.5-mac | OK | Jan 29 2025 |
| R-4.5-linux | OK | Jan 29 2025 |
| R-4.4-win | OK | Jan 29 2025 |
| R-4.4-mac | OK | Jan 29 2025 |
| R-4.3-win | OK | Jan 29 2025 |
| R-4.3-mac | OK | Jan 29 2025 |
Exports:%>%add_mid_p_bin_wbin_widthcls_add_groupcls_colorclustercols_one2multidf2tabledist2dfdistancedraw_layer_constructiongen_exampleind_valis_multi2multiis_one2multiis_one2onemid_pointord_add_groupord_extract_scoreord_plotordinationpad2longestread_bissselect_one2multishditable2dfunique_length
Dependencies:cliclustercolorspacecpp11dendextenddplyrfansifarvergenericsggplot2gluegridExtragtableisobandjsonlitelabdsvlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepermutepillarpkgconfigpurrrR6RColorBrewerRcpprlangRtsnescalesstringistringrtibbletidyrtidyselectutf8vctrsveganviridisviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Helper function for clustering methods | cls_add_group cls_color cluster distance |
| Calculating diversity | d h |
| Convert data.frame and table to each other. | df2table dist2df table2df |
| Draw layer construction plot | add_mid_p_bin_w bin_width draw_layer_construction mid_point |
| Generate vegetation example | gen_example |
| Helper function for Indicator Species Analysis | ind_val |
| Check cols one-to-one, or one-to-multi in data.frame | cols_one2multi is_multi2multi is_one2multi is_one2one select_one2multi unique_length |
| Helper function for ordination methods | ordination ord_add_group ord_extract_score ord_plot |
| Pad a string to the longest width of the strings. | pad2longest |
| Read data from BiSS (Biodiversity Investigation Support System) to data frame. | read_biss |
| Helper function for calculating diversity | shdi |
